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Bacterial
Genomics and Antagonism of Pathobiont Colonization
Viral
Viral Diversity and Pathogenicity in Mucosal Respiratory and Gastrointestinal Disease (Human Norovirus)
Viral Diversity and Pathogenicity in Mucosal Respiratory and Gastrointestinal Disease (RSV)
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Genomic and Phenotypic Diversity of a Human Gut Fungal Pathobiont
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Foox, Jonathan
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2021
Sapoval N
,
Mahmoud M
,
Jochum MD
,
Liu Y
,
Elworth RALeo
,
Wang Q
, et al.
.
SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission.
Genome Res. 2021 ;31(4):635-644.
Butler D
,
Mozsary C
,
Meydan C
,
Foox J
,
Rosiene J
,
Shaiber A
, et al.
.
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.
Nat Commun. 2021 ;12(1):1660.
2020
Sapoval N
,
Mahmoud M
,
Jochum MD
,
Liu Y
,
Elworth RALeo
,
Wang Q
, et al.
.
Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission.
bioRxiv. 2020 ;.
Butler DJ
,
Mozsary C
,
Meydan C
,
Danko D
,
Foox J
,
Rosiene J
, et al.
.
Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.
bioRxiv. 2020 ;.