TMC-GCID Publications

Found 18 results
Filters: Author is Piedra, Pedro A  [Clear All Filters]
2026
Kafer LA, Escapa IF, Boyd AI, Tostado ARivera R, Kambal A, Blutt SE, et al.. Streptococcus pneumoniae colonization modulates human nasal epithelial responses to respiratory syncytial virus infection. bioRxiv. 2026.
2025
Bhamidipati SV, Surathu A, Chao H, Agustinho DP, Xiang Q, Kottapalli K, et al.. Complete genomic characterization of global pathogens respiratory syntical virus and human norovirus using probe based capture enrichment. Sci Rep. 2025 ;15(1):20526.
Avadhanula V, Agustinho DP, Sahni LC, Surathu A, Henke D, Doddapaneni H, et al.. Evolutionary dynamics of Respiratory Syncytial Virus in pre-pandemic, pandemic, and post-pandemic periods in Houston, Texas, USA. bioRxiv. 2025.
Avadhanula V, Creighton CJ, Ferlic-Stark L, Nagaraj D, Zhang Y, Sucgang R, et al.. Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load. PLoS One. 2025 ;20(1):e0317033.
Boyd AI, Kafer LA, Escapa IF, Kambal A, Tariq H, Hilsenbeck SG, et al.. Nasal microbionts differentially colonize and elicit cytokines in human nasal epithelial organoids. bioRxiv. 2025.
Moline HL, Toepfer AP, Tannis A, Weinberg GA, Staat MA, Halasa NB, et al.. Respiratory Syncytial Virus Disease Burden and Nirsevimab Effectiveness in Young Children From 2023-2024. JAMA Pediatr. 2025 ;179(2):179-187.
2024
Henke D, Piedra F-A, Avadhanula V, Doddapaneni H, Muzny DM, Menon VK, et al.. Examining intra-host genetic variation of RSV by short read high-throughput sequencing. bioRxiv. 2024 ;.
Aloisio GM, Nagaraj D, Murray AM, Schultz EM, McBride T, Aideyan L, et al.. Infant-derived human nasal organoids exhibit relatively increased susceptibility, epithelial responses, and cytotoxicity during RSV infection. J Infect. 2024 ;89(6):106305.
Avadhanula V, Agustinho DPaiva, Menon VKumar, Chemaly RF, Shah DP, Qin X, et al.. Inter and intra-host diversity of RSV in hematopoietic stem cell transplant adults with normal and delayed viral clearance. Virus Evol. 2024 ;10(1):vead086.
Aloisio GM, Nagaraj D, Murray AM, Schultz EM, McBride T, Aideyan L, et al.. Pediatric human nose organoids demonstrate greater susceptibility, epithelial responses, and cytotoxicity than adults during RSV infection. bioRxiv. 2024 ;.
2023
Tisza M, Cregeen SJavornik, Avadhanula V, Zhang P, Ayvaz T, Feliz K, et al.. Wastewater sequencing reveals community and variant dynamics of the collective human virome. Nat Commun. 2023 ;14(1):6878.
2022
Piedra F-A, Henke D, Rajan A, Muzny DM, Doddapaneni H, Menon VK, et al.. Modeling nonsegmented negative-strand RNA virus (NNSV) transcription with ejective polymerase collisions and biased diffusion. Front Mol Biosci. 2022 ;9:1095193.
Rajan A, Piedra F-A, Aideyan L, McBride T, Robertson M, Johnson HL, et al.. Multiple Respiratory Syncytial Virus (RSV) Strains Infecting HEp-2 and A549 Cells Reveal Cell Line-Dependent Differences in Resistance to RSV Infection. J Virol. 2022 ;96(7):e0190421.
Chen J, Qiu X, Avadhanula V, Shepard SS, Kim D-K, Hixson J, et al.. Novel and extendable genotyping system for human respiratory syncytial virus based on whole-genome sequence analysis. Influenza Other Respir Viruses. 2022 ;16(3):492-500.
2021
Rajan A, Weaver AMorgan, Aloisio GMarie, Jelinski J, Johnson HL, Venable SF, et al.. The Human Nose Organoid Respiratory Virus Model: an Human Challenge Model To Study Respiratory Syncytial Virus (RSV) and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Pathogenesis and Evaluate Therapeutics. mBio. 2021 ;13(1):e0351121.
Doddapaneni H, Cregeen SJavornik, Sucgang R, Meng Q, Qin X, Avadhanula V, et al.. Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals. PLoS One. 2021 ;16(8):e0244468.
Farinholt T, Doddapaneni H, Qin X, Menon V, Meng Q, Metcalf G, et al.. Transmission event of SARS-CoV-2 delta variant reveals multiple vaccine breakthrough infections. BMC Med. 2021 ;19(1):255.
Avadhanula V, Nicholson EG, Ferlic-Stark L, Piedra F-A, Blunck BN, Fragoso S, et al.. Viral Load of Severe Acute Respiratory Syndrome Coronavirus 2 in Adults During the First and Second Wave of Coronavirus Disease 2019 Pandemic in Houston, Texas: The Potential of the Superspreader. J Infect Dis. 2021 ;223(9):1528-1537.