TMC-GCID Publications

Found 7 results
Filters: Author is Mahmoud, Medhat  [Clear All Filters]
2025
Mahmoud M, Agustinho DP, Sedlazeck FJ. A Hitchhiker's Guide to long-read genomic analysis. Genome Res. 2025 ;35(4):545-558.
2023
Majidian S, Agustinho DPaiva, Chin C-S, Sedlazeck FJ, Mahmoud M. Genomic variant benchmark: if you cannot measure it, you cannot improve it. Genome Biol. 2023 ;24(1):221.
2022
Menon VK, Okhuysen PC, Chappell CL, Mahmoud M, Mahmoud M, Meng Q, et al.. Fully resolved assembly of Cryptosporidium parvum. Gigascience. 2022 ;11.
Menon VK, Okhuysen PC, Chappell CL, Mahmoud M, Mahmoud M, Meng Q, et al.. Fully resolved assembly of Cryptosporidium parvum. Gigascience. 2022 ;11.
Liu Y, Kearney J, Mahmoud M, Kille B, Sedlazeck FJ, Treangen TJ. Rescuing low frequency variants within intra-host viral populations directly from Oxford Nanopore sequencing data. Nat Commun. 2022 ;13(1):1321.
2021
Sapoval N, Mahmoud M, Jochum MD, Liu Y, Elworth RALeo, Wang Q, et al.. SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission. Genome Res. 2021 ;31(4):635-644.
2020
Sapoval N, Mahmoud M, Jochum MD, Liu Y, Elworth RALeo, Wang Q, et al.. Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission. bioRxiv. 2020 ;.